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zen software deconvolution module  (Carl Zeiss)


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    Structured Review

    Carl Zeiss zen software deconvolution module
    Zen Software Deconvolution Module, supplied by Carl Zeiss, used in various techniques. Bioz Stars score: 94/100, based on 35 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/zen+software+deconvolution+module/ZEN+Module+Deconvolution/pm40042894-82-21-20
    Average 94 stars, based on 35 article reviews
    zen software deconvolution module - by Bioz Stars, 2026-09
    94/100 stars

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    Related Articles

    Software:

    Article Title: Live cell imaging reveals 3′-UTR dependent mRNA sorting to synapses
    Article Snippet: .. Z-stacks were subjected to deconvolution using the constrained iterative quantitative restoration method of the Zeiss ZEN software deconvolution module. ..

    Article Title: Synergistic regulation of Rgs4 mRNA by HuR and miR-26/RISC in neurons
    Article Snippet: .. Images were then deconvoluted using the Zeiss Zen software deconvolution module, with default settings of the constrained iterative method and analysed in ImageJ. .. A z-projection of the maximum intensity was performed in ImageJ, and for 128xMS2 particle quantification, one dendrite per cell was selected and straightened using the segmented line tool with 40-pixel width.

    Article Title: RGS4 RNA Secondary Structure Mediates Staufen2 RNP Assembly in Neurons
    Article Snippet: .. The z-stack images were deconvolved using the Zeiss Zen software deconvolution module with 50% of the constrained iterative method settings. .. For the analysis of MS2 localization in dendrites, a maximum intensity z-projection was performed in ImageJ (version 1.50e).

    Article Title: RNA supply drives physiological granule assembly in neurons.
    Article Snippet: .. Z-stacks were subjected to deconvolution using the constrained iterative quantitative restoration method of the Zeiss ZEN software deconvolution module. ..

    Article Title: RNA supply drives physiological granule assembly in neurons
    Article Snippet: .. Z-stacks were subjected to deconvolution using the constrained iterative quantitative restoration method of the Zeiss ZEN software deconvolution module. .. The R – or GraphPad Prism 5 software were used for data processing, plotting, and statistical analysis.

    Article Title: Dynamic regulation of autophagy during Semliki Forest virus infection of neuroblastoma cells
    Article Snippet: The secondary antibody, anti-rabbit AlexaFluor488, was diluted with blocking buffer and incubated at room temperature for 40 min. Coverslips were mounted using FluoroshieldTM with a DAPI mounting medium (Sigma-Aldrich, UK). .. Imaging of multiple z -axis positions was performed using a Zeiss AxioImager M2 system, and images were deconvoluted using the Zeiss Zen software deconvolution module. .. For quantification of LC3-positive punctae, images of only the DyLight 550 channel were selected at random and spots were counted in ImageJ.

    Article Title: Dynamic regulation of autophagy during Semliki Forest virus infection of neuroblastoma cells.
    Article Snippet: The secondary antibody, anti- rabbit AlexaFluor488, was diluted with blocking buffer and incubated at room temperature for 40 min. Coverslips were mounted using FluoroshieldTM with a DAPI mounting medium (Sigma- Aldrich, UK). .. Imaging of multiple z- axis positions was performed using a Zeiss AxioImager M2 system, and images were deconvoluted using the Zeiss Zen software deconvolution module. ..

    Article Title: The dsRBP Staufen2 governs RNP assembly of neuronal Argonaute proteins
    Article Snippet: For cell body fluorescence intensity quantification of eGFP-Ago2, or puromycin, Stau2 and Pum2 protein signal, the measure function in the Zeiss Zen software was used and a region of interest was drawn by hand based on the phase contrast image. .. Analysis of colocalization between endogenous Ago2, Stau2, Dcp1a and Ddx6 was performed by acquisition of z-stacks of whole neurons (35 planes with 0.22 μm step-size), followed by deconvolution using the Zeiss Zen software deconvolution module, with default settings of the constrained iterative method. .. Colocalization analysis was performed blind using ImageJ within the first 15 μm of the dendrite (proximal) and within a 15 μm box ≥20 μm away from the cell body (distal).

    Imaging:

    Article Title: Dynamic regulation of autophagy during Semliki Forest virus infection of neuroblastoma cells
    Article Snippet: The secondary antibody, anti-rabbit AlexaFluor488, was diluted with blocking buffer and incubated at room temperature for 40 min. Coverslips were mounted using FluoroshieldTM with a DAPI mounting medium (Sigma-Aldrich, UK). .. Imaging of multiple z -axis positions was performed using a Zeiss AxioImager M2 system, and images were deconvoluted using the Zeiss Zen software deconvolution module. .. For quantification of LC3-positive punctae, images of only the DyLight 550 channel were selected at random and spots were counted in ImageJ.

    Article Title: Dynamic regulation of autophagy during Semliki Forest virus infection of neuroblastoma cells.
    Article Snippet: The secondary antibody, anti- rabbit AlexaFluor488, was diluted with blocking buffer and incubated at room temperature for 40 min. Coverslips were mounted using FluoroshieldTM with a DAPI mounting medium (Sigma- Aldrich, UK). .. Imaging of multiple z- axis positions was performed using a Zeiss AxioImager M2 system, and images were deconvoluted using the Zeiss Zen software deconvolution module. ..



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